parpe.misc.simulation_to_df

parpe.misc.simulation_to_df(mes_df, sim, result_file, start, observable_ids, root_path='/')[source]

Put simulation results in new PEtab simulation df based on PEtab measurement df mes_df: petab measurement dataframe on which optimization was based sim: simulation results obtained by readSimulationsFromFile() result_file: HDF5-file with optimization results (or input HDF5-file) start: start for which simulation results should be taken observable_ids: observable ids which should be considered root_path: root path to where group fixedParameters is saved in HDF5file